Kajian: Pengembangan Varietas Unggul Baru Padi (Oryza sativa L.) Lokal melalui Iridasi Gamma

Henny Puspita Sari, Irfan Suliansyah, Aswaldi Anwar, Indra Dwipa

Abstract


The widespread use of mutagenesis for plant genetic improvement can be explained by a number of factors, including the fact that new varieties can be developed in a shorter time than conventional breeding methods and that transgenesis is more difficult to re-engineer. Gamma rays are physical mutagens that are often used in plant mutagenesis techniques and are safe for human health because there is no environmental risk in the induced generations. The method used in this paper is by grouping articles according to their relevance to the subject and year of research, and finally managing the explanatory structure. Journal articles for the period 2012 to 2022 were searched using keywords: breeding, mutation, mutagen, rice, and gamma iridation. The selection of selected articles comes from the PubMed, Elsevier, and Springer web sites. This paper integrates the available data on the effects of mutation breeding of plant varieties in different countries and addresses the potential of gamma irrigation as a flexible and practical approach that can be applied to rice crops and an appropriate selection method.


Keywords


genetics; induction; gamma irradiation; mutagens; rice.

Full Text:

PDF

References


Abdelnour-Esquivel, A., Perez, J., Rojas, M., Vargas, W., & Gatica-Arias, A. 2020. Use of gamma radiation to induce mutations in rice (Oryza sativa L.) and the selection of lines with tolerance to salinity and drought. In Vitro Cellular and Developmental Biology - Plant, 56(1), 88–97. https://doi.org/10.1007/s11627-019-10015-5

Ahmed, M. S., Bashar, M. . ., & Shamsuddin, A. K. M. 2016. Diversity Level, Spearman’s Ranking and Core Collections from 98 Rice Germplasm through Quantitative, Qualitative and Molecular Characterizations. Rice Genomics and Genetics, 7(2), 1–10. https://doi.org/10.5376/rgg.2016.07.0002

Andrew-Peter-Leon, M. T., Ramchander, S., Kumar, K. K., Muthamilarasan, M., & Pillai, M. A. 2021. Assessment of efficacy of mutagenesis of gamma-irradiation in plant height and days to maturity through expression analysis in rice. PLoS ONE, 16(1 January), 1–20. https://doi.org/10.1371/journal.pone.0245603

Archanachai, K., Teepoo, S., & Sansenya, S. 2021. Effect of gamma irradiation on growth, proline content, bioactive compound changes, and biological activity of 5 popular Thai rice cultivars. Journal of Bioscience and Bioengineering, 132(4), 372–380.

Ashry, N. A., Ghonaim, M. M., Mohamed, H. I., & Mogazy, A. M. 2018. Physiological and molecular genetic studies on two elicitors for improving the tolerance of six Egyptian soybean cultivars to cotton leaf worm. Plant Physiology and Biochemistry, 130(June), 224–234. https://doi.org/10.1016/j.plaphy.2018.07.010

Bioversity International, IRRI, & WARDA. 2007. Descriptors for wild and cultivated rice (Oryza spp.). Bioversity. Bioversity International, Rome, Italy; International Rice Research Institute, Los Baños, Philippines; WARDA, Africa Rice Center, Cotonou, Benin.

Çelik, Ö., & Atak, Ç. 2017. Applications of Ionizing Radiation in Mutation Breeding. New Insights on Gamma Rays, August. https://doi.org/10.5772/66925

Chitwood, J., Shi, A., Mou, B., Evans, M., Clark, J., Motes, D., Chen, P., & Hensley, D. 2016. Population structure and association analysis of bolting, plant height, and leaf erectness in spinach. HortScience, 51(5), 481–486. https://doi.org/10.21273/hortsci.51.5.481

Chun, J. B., Ha, B. K., Jang, D. S., Song, M., Lee, K. J., Kim, J. B., Kim, S. H., Kang, S. Y., Lee, G. J., Seo, Y. W., & Kim, D. S. 2012. Identification of mutations in OASA1 gene from a gamma-irradiated rice mutant population. Plant Breeding, 131(2), 276–281. https://doi.org/10.1111/j.1439-0523.2011.01933.x

Du, Y., Feng, Z., Wang, J., Jin, W., Wang, Z., Guo, T., Chen, Y., Feng, H., Yu, L., Li, W., & Zhou, L. 2022. Frequency and Spectrum of Mutations Induced by Gamma Rays Revealed by Phenotype Screening and Whole-Genome Re-Sequencing in Arabidopsis thaliana. International Journal of Molecular Sciences, 23(654), 1–22. https://doi.org/10.3390/ijms23020654

El Oualkadi, A., Mouhib, M., & Hajjaj, B. 2019. Study of Radio-Sensitivity of Strawberry Runners cv. Fortuna under Moroccan Conditions. American Journal of Plant Sciences, 10(10), 1921–1931. https://doi.org/10.4236/ajps.2019.1010135

Gajbar, T. D., Kamble, M., Adhikari, S., Konappa, N., Satapute, P., & Jogaiah, S. 2021. Gamma-irradiated fenugreek extracts mediates resistance to rice blast disease through modulating histochemical and biochemical changes. Analytical Biochemistry, 618, 1–10. https://doi.org/10.1016/j.ab.2021.114121

Ghonaim, M. M., Mohamed, H. I., & Omran, A. A. A. 2021. Evaluation of wheat (Triticum aestivum L.) salt stress tolerance using physiological parameters and retrotransposon-based markers. Genetic Resources and Crop Evolution, 68(1), 227–242. https://doi.org/10.1007/s10722-020-00981-w

Gowthami, R., Vanniarajan, C., J. Souframanien, Venib, K., & Renganathan, V. G. 2021. Efficiency of electron beam over gamma rays to induce desirable grain-type mutation in rice (Oryza sativa L.). International Journal of Radiation Biology, 97(5), 727–736. https://doi.org/10.1080/09553002.2021.1889702

Gowthami, R., Vanniarajan, C., Souframanien, J., & Arumugam Pillai, M. 2017. Comparison of radiosensitivity of two rice (Oryza sativa L.) varieties to gamma rays and electron beam in M1 generation. Electronic Journal of Plant Breeding, 8(3), 732–741. https://doi.org/10.5958/0975-928X.2017.00111.9

Harding, S. S., Johnson, S. D., Taylor, D. R., Dixon, C. A., & Turay, M. Y. 2012. Effect of Gamma Rays on Seed Germination, Seedling Height, Survival Percentage and Tiller Production in Some Rice Varieties Cultivated in Sierra Leone. American Journal of Experimental Agriculture, 2(2), 247–255. https://doi.org/10.9734/ajea/2012/820

Hasan, N. A., Rafii, M. Y., Harun, A. R., Ahmad, F., Jaafar, N. N., Ramachandran, K., & Hussein, S. 2020. Radiosensitivity Response To Acute Gamma Irradiation In A Malaysian Rice Variety, MR284. Jurnal Sains Nuklear Malaysia, 32(2), 1–7.

Hase, Y., Satoh, K., Seito, H., & Oono, Y. 2020. Genetic Consequences of Acute/Chronic Gamma and Carbon Ion Irradiation of Arabidopsis thaliana. Frontiers in Plant Science, 11(336), 1–12. https://doi.org/10.3389/fpls.2020.00336

Hernández-Soto, A., Echeverría-Beirute, F., Abdelnour-Esquivel, A., Valdez-Melara, M., Boch, J., & Gatica-Arias, A. 2021. Rice breeding in the new era: Comparison of useful agronomic traits. Current Plant Biology, 27(May). https://doi.org/10.1016/j.cpb.2021.100211

Hidayatun, N., Ramadyanti, D., Koswanuddin, D., & Yunita, E. 2022. Diversity of Quantitative and Qualitative Characters of Rice Grain from Riau Province, Indonesia. Buletin Plasma Nutfah, 27(2), 125. https://doi.org/10.21082/blpn.v27n2.2021.p125-132

Hwang, S. G., Kim, J. H., & Jang, C. S. 2016. A major QTL and a candidate gene for heading date in an early maturing rice mutant induced by gamma ray irradiation. Genes and Genomics, 38(8), 747–756. https://doi.org/10.1007/s13258-016-0419-1

Hwang, S. G., Lee, S. C., Lee, J., Lee, J. W., Kim, J. H., Choi, S. Y., Kim, J. B., Choi, H. Il, & Jang, C. S. 2020. Resequencing of a Core Rice Mutant Population Induced by Gamma-Ray Irradiation and Its Application in a Genome-Wide Association Study. Journal of Plant Biology, 63(6), 463–472. https://doi.org/10.1007/s12374-020-09266-2

Imam, Z., & Chakraborty, N. R. 2019. Induced macro mutational spectrum and frequency of viable mutants in m2 generation of non-basmati aromatic rice. Journal of Pharmacognosy and Phytochemistry, 8(3), 2383–2386.

Islam, F., Azad, M. A. K., & Nath, U. K. 2014. Effect of Gamma Ray on Nerica-1 Rice and Selection of Desirable. Bangladesh J. Nuclear Agric., 30, 13–20.

Islam, M. M., Rahman, M. T., Hasanuzzaman, M., Islam, M. S., Uddin, M. I., & Saha, N. R. 2020. In vitro response and effect of gamma irradiation on four local indica rice varieties. Journal of Scientific Agriculture, August, 90–92. https://doi.org/10.25081/jsa.2020.v4.6307

Islam, M. Z., Khalequzzaman, M., Bashar, M. K., Ivy, N. A., Mian, M. A. K., Pittendrigh, B. R., Haque, M. M., & Ali, M. P. 2018. Variability Assessment of Aromatic Rice Germplasm by Pheno-Genomic traits and Population Structure Analysis. Scientific Reports, 8(1), 1–14. https://doi.org/10.1038/s41598-018-28001-z

Kadhimi, A. A., ALhasnawi, A. N., Isahak, A., Ashraf, M. F., Mohamad, A., Yusoff, W. M. W., & Zain1, C. R. C. M. 2016. Gamma radiosensitivity study on MRQ74 and MR269, two elite varieties of rice (Oryza Sativa L.). Life Science Journal, 13(2), 85–91. https://doi.org/10.7537/marslsj13021614

Kant, A., & Chakraborty, N. R. (2021. Induction of mutation through gamma irradiation in non-basmati aromatic ‘badshabhog’ rice (Oryza sativa L.). Applied Biological Research, 23(1), 50–59. https://doi.org/10.5958/0974-4517.2021.00007.0

Katiyar, P., Pandey, N., & Keshavkant, S. 2022. Gamma radiation: A potential tool for abiotic stress mitigation and management of agroecosystem. Plant Stress, 5(December 2021), 100089. https://doi.org/10.1016/j.stress.2022.100089

Kato, H., Li, F., & Shimizu, A. 2020. The selection of gamma-ray irradiated higher yield rice mutants by directed evolution method. Plants, 9(1004), 1–16. https://doi.org/10.3390/plants9081004

Kumar, P., Prakash, K. S., Jan, K., Swer, T. L., Jan, S., Verma, R., Deepika, K., Dar, M. Z., Verma, K., & Bashir, K. 2017. Effects of gamma irradiation on starch granule structure and physicochemical properties of brown rice starch. Journal of Cereal Science, 77, 194–200. https://doi.org/10.1016/j.jcs.2017.08.017

Kumbhar, S. D., Kulwal, P. L., Patil, J. V., Sarawate, C. D., Gaikwad, A. P., & Jadhav, A. S. 2015. Genetic diversity and population structure in landraces and improved rice varieties from India. Rice Science, 22(3), 99–107. https://doi.org/10.1016/j.rsci.2015.05.013

Lalitha, R., Arunachalam, P., Mothilal, A., Senthil, N., Hemalatha, G., Vanniarajan, C., & Souframanien, J. 2019. Radiation effect on germination and seedling traits in rice (Oryza sativa L.). Electronic Journal of Plant Breeding, 10(3), 1038–1048. https://doi.org/10.5958/0975-928X.2019.00133.9

Lei, Q. Y., Zhou, J. J., Xiong, Y., Zhang, W. H., Luo, J., & Long, C. L. 2021. Genetic diversity evaluation and conservation of kam fragrant glutinous rice (Oryza sativa l.) germplasm in southeast Guizhou, China. Plants, 10(1898), 1–16. https://doi.org/10.3390/plants10091898

Lei, Q., Zhou, J., Zhang, W., Luo, J., Wu, K., & Long, C. 2018. Morphological diversity of panicle traits in Kam fragrant glutinous rice (Oryza sativa). Genetic Resources and Crop Evolution, 65, 775–786. https://doi.org/10.1007/s10722-017-0570-9

Li, F., Shimizu, A., Nishio, T., Tsutsumi, N., & Kato, H. 2019. Comparison and characterization of mutations induced by gamma-ray and carbon-ion irradiation in rice (Oryza sativa L.) using whole-genome resequencing. G3: Genes, Genomes, Genetics, 9(11), 3743–3751. https://doi.org/10.1534/g3.119.400555

Li, R., Li, M., Ashraf, U., Liu, S., & Zhang, J. 2019. Exploring the relationships between yield and yield-related traits for rice varieties released in china from 1978 to 2017. Frontiers in Plant Science, 10(543), 1–12. https://doi.org/10.3389/fpls.2019.00543

Ma, L., Kong, F., Sun, K., Wang, T., & Guo, T. 2021. From Classical Radiation to Modern Radiation: Past, Present, and Future of Radiation Mutation Breeding. Frontiers in Public Health, 9(December), 1–11. https://doi.org/10.3389/fpubh.2021.768071

Maghuly, F., Bado, S., Jankowicz-Cieslak, J., & Laimer, M. 2017. Biotechnologies for Plant Mutation Breeding. In J. Jankowicz-Cieslak, T. H. Tai, J. Kumlehn, & B. J. Till (Eds.), Biotechnologies for Plant Mutation Breeding: Protocols. Springer International Publishing. https://doi.org/10.1007/978-3-319-45021-6_7

Masoabi, M., Lloyd, J., Kossmann, J., & van der Vyver, C. 2018. Ethyl Methanesulfonate Mutagenesis and In Vitro Polyethylene Glycol Selection for Drought Tolerance in Sugarcane (Saccharum spp.). Sugar Tech, 20(1), 50–59. https://doi.org/10.1007/s12355-017-0524-8

Mehmood, S., Ud Din, I., Ullah, I., Mohamed, H. I., Basit, A., Khan, M. N., Hussain Shah, S. S., & ur Rehman, A. 2021. Agro-morphological and genetic diversity studies in Rice (Oryza sativa L.) germplasm using microsatellite markers. Molecular Biology Reports, 48(11), 7179–7192. https://doi.org/10.1007/s11033-021-06710-5

Mohammed, J., Falusi, O., Daudu, O. A. Y., Abubakar, A., Muhammad, L. M., Salihu, B. Z., & Titus, S. D. 2018. Effects of gamma irradiation on submergence tolerance of two selected varieties of lowland rice (Oryza sativa L.). GSC Biological and Pharmaceutical Sciences, 2(3), 031–037. https://doi.org/10.30574/gscbps.2018.2.3.0017

Mounir, A. M., El-Hefny, A. M., Mahmoud, S. H., & El-Tanahy, A. M. M. 2022. Effect of low gamma irradiation doses on growth, productivity and chemical constituents of Jerusalem artichoke (Helianthus tuberosus) tubers. Bulletin of the National Research Centre, 46(1). https://doi.org/10.1186/s42269-022-00838-5

Muto, C., Ebana, K., Kawano, K., Bounphanousay, V., Bounphanousay, C., Kanyavong, K., Inthapanya, P., Boualaphanh, C., Sato, T., Ishikawa, R., Sato, Y. I., Yanagihara, S., & Fukuta, Y. 2019. Genetic variation in rice (Oryza sativa L.) germplasm from northern Laos. Breeding Science, 69(2), 272–278. https://doi.org/10.1270/jsbbs.18086

Nachimuthu, V. V., Raveendran, M., Duraialaguraja, S., Sivakami, R., Pandian, B. A., Ponniah, G., Gunasekaran, K., Swaminathan, M., K K, S., & Sabariappan, R. 2015. Analysis of Population Structure and Genetic Diversity in Rice Germplasm Using SSR Markers: An Initiative Towards Association Mapping of Agronomic Traits in Oryza Sativa. Rice, 8(30), 1–24. https://doi.org/10.1186/s12284-015-0062-5

Njoroge, W., Kinyua, M., Gichuhi, E., Ankamah-yeboah, T., Kwame, S., & Ofori, K. 2022. Radio-Sensitivity of four selected rice ( Oryza sativa L .) varieties in Kenya , as a pre-requisite for mutation breeding. African Journal of Plant Science, 16(8), 210–223. https://doi.org/10.5897/AJPS2022.2278

Ocloo, F. C. K., Owureku-Asare, M., Agyei-Amponsah, J., Agbemavor, W. S. K., Egblewogbe, M. N. Y. H., Apea-Bah, F. B., Sarfo, A., Apatey, J., Doku, H., Ofori-Appiah, D., & Ayeh, E. 2017. Effect of gamma irradiation on physicochemical, functional and pasting properties of some locally-produced rice (Oryza spp) cultivars in Ghana. Radiation Physics and Chemistry, 130, 196–201. https://doi.org/10.1016/j.radphyschem.2016.08.025

Qi, W., Zhang, L., Wang, L., Xu, H., Jin, Q., & Jiao, Z. 2015. Pretreatment with low-dose gamma irradiation enhances tolerance to the stress of cadmium and lead in Arabidopsis thaliana seedlings. Ecotoxicology and Environmental Safety, 115, 243–249. https://doi.org/10.1016/j.ecoenv.2015.02.026

Qi, W., Zhang, L., Xu, H., Wang, L., & Jiao, Z. 2014. Physiological and molecular characterization of the enhanced salt tolerance induced by low-dose gamma irradiation in Arabidopsis seedlings. Biochemical and Biophysical Research Communications, 450(2), 1010–1015. https://doi.org/10.1016/j.bbrc.2014.06.086

Sathesh-Prabu, C., & Lee, Y. K. 2016. Genetic variability and proteome profiling of a radiation induced cellulase mutant mushroom Pleurotus Florida. Polish Journal of Microbiology, 65(3), 271–277. https://doi.org/10.5604/17331331.1215606

Shirasawa, K., Hirakawa, H., Nunome, T., Tabata, S., & Isobe, S. 2016. Genome-wide survey of artificial mutations induced by ethyl methanesulfonate and gamma rays in tomato. Plant Biotechnology Journal, 14(1), 51–60. https://doi.org/10.1111/pbi.12348

Shu, Q. Y., B.P.Forster, & H.Nakagawa (Eds.). 2012. Plant Mutation Breeding and Biotechnology. CAB International CABI.

Smillie, I. R. A., Pyke, K. A., & Murchie, E. H. 2012. In Posidonia oceanica cadmium induces changes in DNA methylation and chromatin patterning. Journal of Experimental Botany, 63(2), 695–709. https://doi.org/10.1093/jxb/err313

Song, J. Y., Kim, D. S., Lee, M. C., Lee, K. J., Kim, J. B., Kim, S. H., Ha, B. K., Yun, S. J., & Kang, S. Y. 2012. Physiological characterization of gamma-ray induced salt tolerant rice mutants. Australian Journal of Crop Science, 6(3), 421–429.

Spencer-Lopes, M. M., Forster, B. P., & Jankuloski, L. (Eds.). 2018. Manual on Mutation Breeding. In Plant Breeding and Genetics Subprogramme Joint FAO/IAEA Division of Nuclear Techniques in Food and Agriculture (Third, pp. 1–319). FAO/IAEA.

Suliansyah, I. 2020. Monograf Perbaikan Tanaman Melalui Teknologi Induksi Mutasi. Penebar Media Pustaka.

Tiwaria, A. K., Sharmab, D., Dasc, B. K., Kumard, V., Sahue, P., Baghelf, S., & Singhg, S. 2018. Improvement of Traditional Local Rice Varieties through Induced Mutations Using Gamma Radiations. International Interdisciplinary Research Journal, 08(02), 405–412. https://doi.org/10.13140/RG.2.2.21569.40801

Viana, V. E., Pegoraro, C., Busanello, C., & Costa de Oliveira, A. 2019. Mutagenesis in Rice: The Basis for Breeding a New Super Plant. Frontiers in Plant Science, 10(1326), 1–28. https://doi.org/10.3389/fpls.2019.01326

Wang, X., Ma, R., Cui, D., Cao, Q., Shan, Z., & Jiao, Z. 2017. Physio-biochemical and molecular mechanism underlying the enhanced heavy metal tolerance in highland barley seedlings pre-treated with low-dose gamma irradiation. Scientific Reports, 7(1), 1–14. https://doi.org/10.1038/s41598-017-14601-8

Warman, B., Suliansyah, I., Swasti, E., Syarif, A., & Alfi, H. 2015. Selection and semi-dwarf allele mutants segregation pattern as the result of gamma ray irradiation of West Sumatera black rice. International Journal on Advanced Science, Engineering and Information Technology, 5(5), 362–365. https://doi.org/10.18517/ijaseit.5.5.560

Weerakoon, S., & Somaratne, S. 2021. Development of a core collection from Sri Lankan traditional rice (Oryza sativa) varieties for phenotypic and genetic diversity. Nusantara Bioscience, 13(1), 61–67. https://doi.org/10.13057/nusbiosci/n130109

Zanzibar, M., & J. Sudrajat, D. 2016. Effect of gamma irradiation on seed germination, storage, and seedling growth of Magnolia champaca L. Indonesian Journal of Forestry Research, 3(2), 95–106. https://doi.org/10.20886/ijfr.2016.3.2.95-106




DOI: http://dx.doi.org/10.33087/jiubj.v23i1.3017

Refbacks

  • There are currently no refbacks.


Creative Commons License
This work is licensed under a Creative Commons Attribution-ShareAlike 4.0 International License.

ADRESS JOURNAL

JURNAL ILMIAH UNIVERSITAS BATANGHARI JAMBI (JIUBJ)
Published by Lembaga Penelitian dan Pengabdian kepada Masyarakat
Adress: Jl.Slamet Ryadi, Broni-Jambi, Kec.Telanaipura, Kodepos: 36122, email: jiubj.unbari@gmail.com, Phone: 0741-670700

Creative Commons License This work is licensed under a Creative Commons Attribution-ShareAlike 4.0 International License.